Data here contain and describe an open-source structured query language (SQLite) portable database containing high resolution mass spectrometry data (MS1 and MS2) for per- and polyfluorinated alykl substances (PFAS) and associated metadata regarding their measurement techniques, quality assurance metrics, and the samples from which they were produced. These data are stored in a format adhering to the Database Infrastructure for Mass Spectrometry (DIMSpec) project. That project produces and uses databases like this one, providing a complete toolkit for non-targeted analysis. See more information about the full DIMSpec code base - as well as these data for demonstration purposes - at GitHub (https://github.com/usnistgov/dimspec) or view the full User Guide for DIMSpec (https://pages.nist.gov/dimspec/docs).Files of most interest contained here include the database file itself (dimspec_nist_pfas.sqlite) as well as an entity relationship diagram (ERD.png) and data dictionary (DIMSpec for PFAS_1.0.1.20230615_data_dictionary.json) to elucidate the database structure and assist in interpretation and use.
About this Dataset
| Title | Database Infrastructure for Mass Spectrometry - Per- and Polyfluoroalkyl Substances |
|---|---|
| Description | Data here contain and describe an open-source structured query language (SQLite) portable database containing high resolution mass spectrometry data (MS1 and MS2) for per- and polyfluorinated alykl substances (PFAS) and associated metadata regarding their measurement techniques, quality assurance metrics, and the samples from which they were produced. These data are stored in a format adhering to the Database Infrastructure for Mass Spectrometry (DIMSpec) project. That project produces and uses databases like this one, providing a complete toolkit for non-targeted analysis. See more information about the full DIMSpec code base - as well as these data for demonstration purposes - at GitHub (https://github.com/usnistgov/dimspec) or view the full User Guide for DIMSpec (https://pages.nist.gov/dimspec/docs).Files of most interest contained here include the database file itself (dimspec_nist_pfas.sqlite) as well as an entity relationship diagram (ERD.png) and data dictionary (DIMSpec for PFAS_1.0.1.20230615_data_dictionary.json) to elucidate the database structure and assist in interpretation and use. |
| Modified | 2023-07-05 00:00:00 |
| Publisher Name | National Institute of Standards and Technology |
| Contact | mailto:[email protected] |
| Keywords | per- and polyfluoroalkyl substances , PFAS , database , mass spectrometry , SQLite , emerging contaminants , high resolution mass spectrometry , non-targeted analysis , NTA , HRMS |
{
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"accessLevel": "public",
"contactPoint": {
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"fn": "Benjamin Place"
},
"programCode": [
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"landingPage": "https:\/\/data.nist.gov\/od\/id\/mds2-2905",
"title": "Database Infrastructure for Mass Spectrometry - Per- and Polyfluoroalkyl Substances",
"description": "Data here contain and describe an open-source structured query language (SQLite) portable database containing high resolution mass spectrometry data (MS1 and MS2) for per- and polyfluorinated alykl substances (PFAS) and associated metadata regarding their measurement techniques, quality assurance metrics, and the samples from which they were produced. These data are stored in a format adhering to the Database Infrastructure for Mass Spectrometry (DIMSpec) project. That project produces and uses databases like this one, providing a complete toolkit for non-targeted analysis. See more information about the full DIMSpec code base - as well as these data for demonstration purposes - at GitHub (https:\/\/github.com\/usnistgov\/dimspec) or view the full User Guide for DIMSpec (https:\/\/pages.nist.gov\/dimspec\/docs).Files of most interest contained here include the database file itself (dimspec_nist_pfas.sqlite) as well as an entity relationship diagram (ERD.png) and data dictionary (DIMSpec for PFAS_1.0.1.20230615_data_dictionary.json) to elucidate the database structure and assist in interpretation and use.",
"language": [
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"distribution": [
{
"downloadURL": "https:\/\/data.nist.gov\/od\/ds\/mds2-2905\/ERD.png",
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"mediaType": "image\/png",
"title": "Entity Relationship Diagram"
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{
"downloadURL": "https:\/\/data.nist.gov\/od\/ds\/mds2-2905\/DIMSpec%20for%20PFAS_1.0.1.20230615_data_dictionary.json",
"format": "Javascript Object Notation (JSON)",
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{
"downloadURL": "https:\/\/data.nist.gov\/od\/ds\/mds2-2905\/LICENSE.pdf",
"format": "Portable Document File (PDF)",
"description": "The license for use and reuse accompanying these data.",
"mediaType": "application\/pdf",
"title": "Use Licence"
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{
"downloadURL": "https:\/\/data.nist.gov\/od\/ds\/mds2-2905\/README.pdf",
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{
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}