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A mathematical framework to correct for compositionality in microbiome datasets

This repository provides the raw data and analysis code used to demonstrate the implementation of a mathematical framework that uses internal standards to correct for compositionally in MGS datasets. Some of the data contained herein was previously published and is reanalyzed in the context of this new framework, while other datasets represent newly analyzed samples. Please refer to the associated publication for further discussion and a full exploration of the results.

About this Dataset

Updated: 2025-09-09
Metadata Last Updated: 2025-03-13 00:00:00
Date Created: N/A
Data Provided by:
Dataset Owner: N/A

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Title A mathematical framework to correct for compositionality in microbiome datasets
Description This repository provides the raw data and analysis code used to demonstrate the implementation of a mathematical framework that uses internal standards to correct for compositionally in MGS datasets. Some of the data contained herein was previously published and is reanalyzed in the context of this new framework, while other datasets represent newly analyzed samples. Please refer to the associated publication for further discussion and a full exploration of the results.
Modified 2025-03-13 00:00:00
Publisher Name National Institute of Standards and Technology
Contact mailto:[email protected]
Keywords Compositionality , scaled abundance , internal standard , experimental design , metagenomic sequencing
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