This digitized histological slide collection includes tissue biopsies from wild colonies of Colpophyllia natans (CNAT) located at three sites throughout the Dry Tortugas and collected at four time points to capture pre-disease and endemic disease states (September 2021, February 2022, June 2022, and August 2022). Slides were stained with either hematoxylin and eosin stains to highlight tissue morphology or Movat’s pentachrome stain to differentiate connective tissues (mucin, collagen, elastin, myosin). All slides were scanned on a digital slide scanner to a maximum magnification of 40x. All images are in an .svs format. This dataset only includes the raw histological slide collection and associated metadata from biopsied coral colonies. Results from the analysis of the histological slides will be available from partner labs in separate associated datasets
About this Dataset
Title | NCCOS Assessment: Digitized histological slides for stony coral tissue loss disease (SCTLD) development in Colpophyllia natans colonies located in the Dry Tortugas, 2021-09-01 to 2022-08-01 (NCEI Accession 0302466) |
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Description | This digitized histological slide collection includes tissue biopsies from wild colonies of Colpophyllia natans (CNAT) located at three sites throughout the Dry Tortugas and collected at four time points to capture pre-disease and endemic disease states (September 2021, February 2022, June 2022, and August 2022). Slides were stained with either hematoxylin and eosin stains to highlight tissue morphology or Movat’s pentachrome stain to differentiate connective tissues (mucin, collagen, elastin, myosin). All slides were scanned on a digital slide scanner to a maximum magnification of 40x. All images are in an .svs format. This dataset only includes the raw histological slide collection and associated metadata from biopsied coral colonies. Results from the analysis of the histological slides will be available from partner labs in separate associated datasets |
Modified | 2025-04-20T23:11:14.124Z |
Publisher Name | N/A |
Contact | N/A |
Keywords | 0302466 , CORAL , CORAL - SPECIES IDENTIFICATION , camera , biological , imagery , laboratory analyses , Louisiana State University , US DOC; NOAA; NOS; National Centers for Coastal Ocean Science , US DOC; NOAA; NOS; National Centers for Coastal Ocean Science , Coral Reef Conservation Program (CRCP) , CORAL REEF STUDIES , Caribbean Sea , North Atlantic Ocean , oceanography , DOC/NOAA/NOS/NCCOS > National Centers for Coastal Ocean Science, National Ocean Service, NOAA, U.S. Department of Commerce , 31618 , Use of 'Omics for Coral Restoration and Disease Investigations , Visual Images > Corals , Visual Images > Histology , Visual Images > Invertebrates , EARTH SCIENCE > Biosphere > Zoology > Corals , EARTH SCIENCE > Biosphere > Zoology > Corals > Coral Condition , EARTH SCIENCE > Biosphere > Zoology > Corals > Coral Diseases , EARTH SCIENCE > Biosphere > Zoology > Corals > Coral Mortality , EARTH SCIENCE > Oceans > Marine Biology > Coral , EARTH SCIENCE > SOLID EARTH > GEOMORPHIC LANDFORMS/PROCESSES > COASTAL LANDFORMS > CORAL REEFS , NCCOS Research Priority > Stressor Impacts and Mitigation , NCCOS Research Topic > Regional Ecosystem Science , NCCOS Research Data Type > Field Experiment , Colpophyllia natans , Digitized histology slides of diseased coral tissues , SCTLD , Stony coral tissue loss disease , histological analysis , CAMERA > CAMERA , Digital Slide Scanner (40x) with EasyScanInfinity software , EasyScanInfinity , MoticamProS12 PlusDigital Slide Scanner (40x) , COUNTRY/TERRITORY > United States of America > Florida , COUNTRY/TERRITORY > United States of America > Florida > Florida Reef Tract (25N080W0002) , COUNTRY/TERRITORY > United States of America > Florida > Florida Reef Tract (26N080W0007) , COUNTRY/TERRITORY > United States of America > Florida > Monroe County > Dry Tortugas (24N082W0001) , OCEAN BASIN > Atlantic Ocean , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract (26N080W0007) , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Dry Tortugas > Dry Tortugas (24N082W0001) , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Florida Reef Tract (25N080W0002) , OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN , OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > CARIBBEAN SEA , NCCOS Research Location > Region > Atlantic Ocean , NCCOS Research Location > U.S. States and Territories > Florida , COUNTRY/TERRITORY > United States of America > Florida > Florida Reef Tract , COUNTRY/TERRITORY > United States of America > Florida > Monroe County > Dry Tortugas , Dry Tortugas National Park , OCEAN BASIN > Atlantic Ocean , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Dry Tortugas > Dry Tortugas , OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Florida Keys , R4D5HF , environment , oceans , imageryBaseMapsEarthCover , biota |
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