Dataset Search
Sort By
Search results
70 results found
Software and Data associated with "Binding, Brightness, or Noise? Extracting Temperature-dependent Properties of Dye Bound to DNA"
Data provided by National Institute of Standards and Technology
The purpose of this software and data is to enable reproduction and facilitate extension of the computational results associated with the following referenceDeJaco, R. F.; Majikes, J. M.; Liddle, J. A.; Kearsley, A. J. Binding, Brightness, or Noise? Extracting Temperature-dependent Properties of Dye Bound to DNA. Biophysical Journal, 2023, https://doi.org/10.1016/j.bpj.2023.03.002.The software and data can also be found at https://github.com/usnistgov/dye_dna_plates.
Tags: fluorescence,numerical-optimization,mathematical-modeling,fluorescence-data,total-least-squares,python,intercalating dyes,noise-removal,
Modified: 2025-04-06
Towards a Structured Evaluation Methodology for Artificial Intelligence Technology (SEMAIT) MIg analyZeR (mizr) Package
Data provided by National Institute of Standards and Technology
Our work towards a Structured Evaluation Methodology for Artificial Intelligence Technology (SEMAIT) aims to provide plots, tools, methods, and strategies to extract insights out of various machine learning (ML) and Artificial Intelligence (AI) data.Included in this software is the MIg analyZeR (mizr) R software package that produces various plots.
Tags: analysis software,Artificial Intelligence,machine learning,design of experiments,
Modified: 2025-04-06
A Data-Driven Approach to Complex Voxel Predictions in Grayscale Digital Light Processing Additive Manufacturing Using U-nets and Generative Adversarial Networks
Data provided by National Institute of Standards and Technology
Digital light processing (DLP) vat photopolymerization (VP) additive manufacturing (AM) uses patterned UV light to selectively cure a liquid photopolymer into a solid layer. Subsequent layers are printed on to preceding layers to eventually form a desired 3 dimensional (3D) part. This data set characterizes the 3D geometry of a single layer of voxels (volume pixels) printed with photomasks assigned random intensity levels at every pixel. The masks are computer generated, then printed onto a glass cover slide.
Tags: 3D printing,additive manufacturing,machine learning,generative adversarial network,Photopolymer,
Modified: 2025-04-06
O-RAN with Machine Learning in ns-3
Data provided by National Institute of Standards and Technology
This dataset contains a comparison of packet loss counts vs handovers using four different methods: baseline, heuristic, distance, and machine learning, as well as the data used to train a machine learning model. This data was generated as a result of the work described in the paper, "O-RAN with Machine Learning in ns-3," by the authors Wesley Garey, Tanguy Ropitault, Richard Rouil, Evan Black, and Weichao Gao from the 2023 Workshop on ns-3 (WNS3 2023), that was June 28-29, 2023, in Arlington, VA, USA, and published by ACM, New York, NY, USA.
Tags: O-RAN,ns-3,LTE,ONNX,Mobile Networks,modeling and simulation,machine learning,
Modified: 2025-04-06
Thermal Drift Monitoring Experiment 01
Data provided by National Institute of Standards and Technology
An experiment was set up within a machine tool at the National Institute of Standards and Technology (NIST) to test vision-based thermal drift tracking methods. A wireless microscope within a tool holder in the spindle is used to capture videos of image targets attached to the worktable. For each target, one video is captured during spindle rotation orthogonal to the worktable and another video is captured during axis translation orthogonal to the worktable.
Tags: Thermal error,machine tool,monitoring,manufacturing,Microscope,
Modified: 2025-04-06
Optimal Bayesian Experimental Design Version 1.2.0
Data provided by National Institute of Standards and Technology
Python module 'optbayesexpt' uses optimal Bayesian experimental design methods to control measurement settings in order to efficiently determine model parameters. Given an parametric model - analogous to a fitting function - Bayesian inference uses each measurement 'data point' to refine model parameters. Using this information, the software suggests measurement settings that are likely to efficiently reduce uncertainties. A TCP socket interface allows the software to be used from experimental control software written in other programming languages.
Tags: GitHub pages template,experimental design,Bayesian,optbayesexpt,python,adaptive measurement,
Modified: 2025-04-06
analphipy: A python package to analyze pair-potential metrics.
Data provided by National Institute of Standards and Technology
`analphipy` is a python package to calculate metrics for classical models for pair potentials. It provides a simple and extendable api for pair potentials creation. Several routines to calculate metrics are included in the package. The main features of `analphipy` are 1) Pre-defined spherically symmetric potentials. 2) Simple interface to extended to user defined pair potentials. 3) Routines to calculate Noro-Frenkel effective parameters. 4) Routines to calculate Jensen-Shannon divergence.
Tags: python,statistical mechanics,
Modified: 2025-04-06
CyRSoXS: A GPU-accelerated virtual instrument for Polarized Resonant Soft X-ray Scattering (P-RSoXS)
Data provided by National Institute of Standards and Technology
Polarized Resonant Soft X-ray scattering (P-RSoXS) has emerged as a powerful synchrotron-based tool to measure structure in complex, chemically heterogeneous systems. P-RSoXS combines principles of X-ray scattering and X-ray spectroscopy; this combination provides unique sensitivity to molecular orientation and chemical heterogeneity in soft materials such as polymers and biomaterials.
Tags: polymer,python,C++,CUDA,polymer nanocomposite,polymer solution,X-ray scattering,software,tool,computation,
Modified: 2025-04-06
tmmc-lnpy: A python package to analyze Transition Matrix Monte Carlo lnPi data.
Data provided by National Institute of Standards and Technology
A python package to analyze ``lnPi`` data from Transition Matrix Monte Carlo(TMMC) simulation. The main output from TMMC simulations, ``lnPi``, provides a means to calculate a host of thermodynamicproperties. Moreover, if ``lnPi`` is calculated at a specific chemical potential, it can be reweighted to providethermodynamic information at a different chemical potential. The python package``tmmc-lnpy`` provides a wide array of routines to analyze ``lnPi`` data.
Tags: python,molecular simulation,data analysis,Transition Matrix Monte Carlo,statistical mechanics,
Modified: 2025-04-06
FCpy: Feldman-Cousins Confidence Interval Calculator
Data provided by National Institute of Standards and Technology
Python scripts and Python+Qt graphical user interface for calculating Feldman-Cousins confidence intervals for low-count Poisson processes in the presence of a known background and for Gaussian processes with a physical lower limit of 0.
Tags: python,SIMS,statistics,mass spectrometry,Confidence Interval,CI,Feldman,Cousins,Poisson,Gaussian,
Modified: 2025-04-06