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37 results found

Hydrogen-Deuterium Exchange Mass Spectrometry (HDX-MS) Centroid Data measured between 3.6 degrees C and 25.4 degrees C for the Fab Fragment of NISTmAb

Data provided by  National Institute of Standards and Technology

The spreadsheet file reported herein provides centroid data, descriptive of deuterium uptake, for the Fab Fragment of NISTmAb (PDB: 5K8A) reference material, as measured by the bottom-up hydrogen-deuterium exchange mass spectrometry (HDX-MS) method. The protein sample was incubated in deuterium-rich solutions under uniform pH and salt concentrations between 3.6 degrees C and 25.4 degrees C for seven intervals ranging (0 to 14,400) s plus a control sample that simulates a Fab Fragment immersed for infinite time in D2O.

Tags: hydrogen-deuterium exchange,hydrogen exchange,HDX-MS,interlaboratory comparison,mass spectrometry,peptide,precision,proteomics,reference material,repeatability,reproducibility,

Modified: 2022-07-29

Views: 0

ml_uncertainty: A Python module for estimating uncertainty in predictions of machine learning models

Data provided by  National Institute of Standards and Technology

This software is a Python module for estimating uncertainty in predictions of machine learning models. It is a Python package that calculates uncertainties in machine learning models using bootstrapping and residual bootstrapping. It is intended to interface with scikit-learn but any Python package that uses a similar interface should work.

Tags: uncertainty analysis,machine learning,model calibration,

Modified: 2022-07-29

Views: 0

Construction of a Dual-enzyme, Subzero (-30 degree C) Chromatography System and Multi-channel Precision Temperature Controller for Hydrogen-Deuterium Exchange Mass Spectrometry

Data provided by  National Institute of Standards and Technology

This tutorial provides mechanical drawings, electrical schematics, parts lists, STL files for 3D-printed parts, IGS files, and instructions for automated machining necessary for construction of a dual-protease, subzero, liquid chromatography system for hydrogen-deuterium exchange mass spectrometry. Electrical schematics for construction of a multi-zone temperature controller that regulate to ±0.1 oC are also included in this tutorial.

Tags: liquid chromatography,hydrogen-deuterium exchange,mass spectrometry,precision,peptide,protein,proteolysis,proteomics,reference material,temperature control.,

Modified: 2022-07-29

Views: 0

NIST/EPA Gas-Phase Infrared Database JCAMP Format - SRD 35

Data provided by  National Institute of Standards and Technology

This data collection contains 5,228 infrared spectra of different compounds along with chemical structures for most of them. Spectra are provided on a CD-ROM in the JCAMP-DX (Joint Committee for Atomic and Molecular Physical Data 'Data Exchange') format. Chemical structures are provided in the MOL-file format. The IR data originated from two sources, from the so-called 'EPA Vapor-Phase IR Library' and from NIST laboratories.

Tags: Joint Committee for Atomic and Molecular Physical Data,absorption spectra,chemical structures,gas phases,gases,infra red,infrared spectra,mass spectra,mass spectrometry,molecular spectroscopy,molecular vibrations,physics,spectra,spectroscopy,structural data,structures,vapor phase infrared,

Modified: 2022-07-29

Views: 0

NIST Atomic Weights and Isotopic Compositions with Relative Atomic Masses

Data provided by  National Institute of Standards and Technology

The atomic weights are available for elements 1 through 118 and isotopic compositions or abundances are given when appropriate. Version 3.0.

Tags: Commission on Atomic Weights and Isotopic Abundances,International Union for Pure and Applied Chemistry,SIAM,atomic mass evaluation,Atomic Weights,Elemental Data,elements,mass spectrometry,measurements,physics,relative atomic masses,representative isotopic compositions,statistical evaluation of isotopic abundances,subcommittee for isotopic abundance,

Modified: 2022-07-29

Views: 0

NIST Synthetic Polymer MALDI Methods Database

Data provided by  National Institute of Standards and Technology

This resource consists of methods for matrix-assisted laser desorption ionization (MALDI) mass spectrometry on a wide variety of synthetic polymers. The methods are taken from the peer-review scientific literature. The database covers the period from 1988, the year of Tanaka's first paper on the subject, through 2011. Each recipe comes with a literature citation and associated digital object identifier (DOI) when available. The database currently contains entries for over 1250 polymer/matrix combinations.

Tags: MALDI,mass spectrometry,polymers,

Modified: 2022-07-29

Views: 0

NIST/EPA/NIH Mass Spectral Library with Search Program - SRD 1a

Data provided by  National Institute of Standards and Technology

This database is the product of a multi-year, comprehensive evaluation and expansion of the world's most widely used mass spectral reference library.

Tags: HAPS,chemical analysis,chemical structures,gas chromatography,hazardous air pollutants,mass spectra,mass spectrometry,masses,physics,spectra,structural data,structures,

Modified: 2022-07-29

Views: 0

Raw data files that were used in writing "Analysis of human plasma metabolites across different liquid chromatography/mass spectrometry platforms: Cross-platform transferable chemical signatures" by K...

Data provided by  National Institute of Standards and Technology

Liquid-chromatography-mass spectrometry (LC-MS) raw data sets from various instruments delivered in their native instrument format. 31 files in all. 7.5 GB data.

Tags: human blood plasma,metabolomics,mass spectrometry,liquid chromatography,SRM 1950,

Modified: 2022-07-29

Views: 0

Mass spectra of sulfonephthalein pH indicator dyes and their impurities

Data provided by  National Institute of Standards and Technology

Sulfonephthalein pH indicator dyes have historically been noted for impurities originating from the synthesis process which lead to batch to batch differences in pH measurements. Uncertainties up to 0.1 pH units have been attributed to impurities in these reagents.

Tags: pH indicators,mass spectrometry,seawater pH,

Modified: 2022-07-29

Views: 0

QFlow 2.0: Quantum dot data for machine learning

Data provided by  National Institute of Standards and Technology

Using a modified Thomas-Fermi approximation, we model a reference semiconductor system comprising a quasi-1D nanowire with a series of five depletion gates whose voltages determine the number of quantum dots (QDs), the charges on each of the QDs, as well as the conductance through the wire. The original dataset, QFlow lite, consists of 1 001 idealized simulated measurements with gate configurations sampling over different realizations of the same type of device.

Tags: machine learning,quantum dots,simulated data,

Modified: 2022-07-29

Views: 0